LYST, lysosomal trafficking regulator, 1130

N. diseases: 114; N. variants: 18
Source: ALL
Variant DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Disease Class Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs9782955
rs9782955
1.000 0.080 1 235876577 intron variant T/C snv 0.82
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic
Skin and Connective Tissue Diseases; Immune System Diseases 0.700 1.000 2 2009 2015
dbSNP: rs4660116
rs4660116
1.000 0.080 1 235865541 intron variant T/C snv 0.81
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic
Skin and Connective Tissue Diseases; Immune System Diseases 0.700 1.000 1 2015 2015
dbSNP: rs1078859
rs1078859
1 235748725 intron variant C/A snv 0.26
Finding of Mean Corpuscular Hemoglobin
0.700 1.000 1 2019 2019
dbSNP: rs151337641
rs151337641
1.000 0.080 1 235781046 missense variant A/G snv 6.8E-05 1.8E-04
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis
Immune System Diseases; Nervous System Diseases 0.010 1.000 1 2017 2017
dbSNP: rs80338652
rs80338652
1.000 0.160 1 235805826 stop gained G/A snv 1.2E-05 1.4E-05
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.710 1.000 5 1996 2017
dbSNP: rs80338652
rs80338652
1.000 0.160 1 235805826 stop gained G/A snv 1.2E-05 1.4E-05
CHEDIAK-HIGASHI SYNDROME, ADULT TYPE
0.700 0
dbSNP: rs28942077
rs28942077
1.000 0.160 1 235766204 missense variant A/G;T snv 4.0E-06
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.800 1.000 2 2002 2014
dbSNP: rs757222354
rs757222354
1.000 0.160 1 235775041 stop gained G/A;T snv 4.0E-06; 4.0E-06
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.010 1.000 1 2011 2011
dbSNP: rs771549954
rs771549954
1.000 0.080 1 235812976 missense variant G/C snv 1.2E-05
CUI: C0002736
Disease: Amyotrophic Lateral Sclerosis
Amyotrophic Lateral Sclerosis
Nutritional and Metabolic Diseases; Nervous System Diseases 0.010 1.000 1 2009 2009
dbSNP: rs797044542
rs797044542
1.000 0.160 1 235664487 missense variant C/T snv
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.010 1.000 1 2014 2014
dbSNP: rs80338651
rs80338651
1.000 0.160 1 235806051 stop gained G/A snv
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.710 1.000 1 1997 1997
dbSNP: rs28942077
rs28942077
1.000 0.160 1 235766204 missense variant A/G;T snv 4.0E-06
CHEDIAK-HIGASHI SYNDROME, ADULT TYPE
0.700 0
dbSNP: rs80338642
rs80338642
1.000 0.160 1 235830299 frameshift variant -/C delins 8.4E-05
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.700 0
dbSNP: rs80338642
rs80338642
1.000 0.160 1 235830299 frameshift variant -/C delins 8.4E-05
CHEDIAK-HIGASHI SYNDROME, CHILDHOOD TYPE
0.700 0
dbSNP: rs80338643
rs80338643
1.000 0.160 1 235830270 stop gained G/A;C snv 4.0E-06
CHEDIAK-HIGASHI SYNDROME, CHILDHOOD TYPE
0.700 0
dbSNP: rs80338643
rs80338643
1.000 0.160 1 235830270 stop gained G/A;C snv 4.0E-06
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.700 0
dbSNP: rs80338644
rs80338644
1.000 0.160 1 235809351 frameshift variant C/- del
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.700 0
dbSNP: rs80338644
rs80338644
1.000 0.160 1 235809351 frameshift variant C/- del
CHEDIAK-HIGASHI SYNDROME, CHILDHOOD TYPE
0.700 0
dbSNP: rs80338646
rs80338646
1.000 0.160 1 235808916 frameshift variant T/-;TT delins
CHEDIAK-HIGASHI SYNDROME, CHILDHOOD TYPE
0.700 0
dbSNP: rs80338646
rs80338646
1.000 0.160 1 235808916 frameshift variant T/-;TT delins
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.700 0
dbSNP: rs80338649
rs80338649
1.000 0.160 1 235806513 frameshift variant A/- delins
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.700 0
dbSNP: rs80338649
rs80338649
1.000 0.160 1 235806513 frameshift variant A/- delins
CHEDIAK-HIGASHI SYNDROME, CHILDHOOD TYPE
0.700 0
dbSNP: rs80338651
rs80338651
1.000 0.160 1 235806051 stop gained G/A snv
CHEDIAK-HIGASHI SYNDROME, CHILDHOOD TYPE
0.700 0
dbSNP: rs80338657
rs80338657
1.000 0.160 1 235788701 missense variant C/T snv
CHEDIAK-HIGASHI SYNDROME, ADULT TYPE
0.700 0
dbSNP: rs80338657
rs80338657
1.000 0.160 1 235788701 missense variant C/T snv
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.700 0